I am not sure about the idle issue...do you have a cam with a long duration? Lots of things can be going on here at idle...you have the base running airflow, which should handle this area in theory...not the VVE table, but you also have the MAF and then you have the Dynamic Airflow High RPM disable. Either way you'll get the hang of it as you make changes and collect logs.
Personally, I made my own spreadsheet to tackle the VVE tuning and I really focus on on the VVE zone at a time. This way after I copy/paste the histogram, either by full or half percent and then calculate the coefficients, I can see if that caused an unnatural dip or bubble that is going to mess up other areas of the zone. I also have gone through re-doing the RPM/MAP zones several times to fit what works for my combination.