I see this often. 3 times in the past week on here alone.
There are two settings in the transient section that need to be changed.
ECM 2284
ECM 2282
I've seen some people say to reduce it by the same proportion as your injectors are from stock. That seems reasonable. I've never had an issue just completely zeroing them out.
There are no units on these values, although the first has Milligrams in the name. I ASSume they are min pw or min pump shot the transient can call for. That same PW or PS on a larger injector is far too much. This value effects things other than transient (pedal movement) like straight up idle. In fact the difference noticed after changing this can be fall directly into the steady state category and not transient.